The detailed information of tRNA gene sequence


Sequence ID>WENV183750623
Genome IDPPYE01000081
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 59285
End posion on genome 59200
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aggaagtttt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGTACCGCGAGGTACC
CGGGGTTCGAATCCCTGTCTCTCCGCtg
Downstream region at tRNA end position 
gaaagaattg
Secondary structure (Cloverleaf model)
>WENV183750623	Ser	TGA
                   t      GCtg gaaagaattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGTACCGCGAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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