The detailed information of tRNA gene sequence


Sequence ID>WENV183751051
Genome IDPPYE01002084
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1802
End posion on genome 1729
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cgggcaatgg
tRNA gene sequence 
GGGCTAGTAGCTCAGTTGGTCAGAGCTGGCGGCTCATAACCGCTTGGTCCCGGGTTCAAG
TCCTGGCTGGCCCAtac
Downstream region at tRNA end position 
aaaaaagaca
Secondary structure (Cloverleaf model)
>WENV183751051	Ile2	CAT
                   g      Atac aaaaaagaca
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        T     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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