The detailed information of tRNA gene sequence


Sequence ID>WENV183751466
Genome IDPPYE01014187
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 234
End posion on genome 137
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatttaatac
tRNA gene sequence 
GGGGGTAGTTGGGTAACTGGTGTGCCTCCTAGTCTTCAAAACTAGTGTGGGGCGTTAAGA
GCGTCCCGGGTGGGTTCGATTCCCACATGCCTCCGCCA
Downstream region at tRNA end position 
aaagagagga
Secondary structure (Cloverleaf model)
>WENV183751466	SeC	TCA
                   c      GCCA aaagagagga
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    T     C A C C C     A
      C A A        T      | | | | |     G
    T       T G G G       G T G G G     C
    G       + | | +                 T T
    G       G C C T
      T G T        C     TGTGGGGCGTTAAGAGCGTCCCGG
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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