The detailed information of tRNA gene sequence


Sequence ID>WENV183751533
Genome IDPPYE01017959
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1341
End posion on genome 1416
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gaagatatat
tRNA gene sequence 
CGCGGGATGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGGAGGTTCGAGT
CCTCCTCCCGCTACCA
Downstream region at tRNA end position 
aaggggctaa
Secondary structure (Cloverleaf model)
>WENV183751533	fMet	CAT
                   t      ACCA aaggggctaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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