The detailed information of tRNA gene sequence


Sequence ID>WENV183751550
Genome IDPPYE01019068
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 549
End posion on genome 463
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtttgttgt
tRNA gene sequence 
GGAGAGGTCGCATAGAGGCCGAGTGCGCACGCTTGGAAAGCGTGTAGTCCTTAACGGGGC
TCGGGGGTTCGAATCCCCTCCTCTCCTttt
Downstream region at tRNA end position 
agaaatagac
Secondary structure (Cloverleaf model)
>WENV183751550	Ser	GGA
                   t      Tttt agaaatagac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C C C     A
      A G A        C      + | | | |     G
    G       T A C G       G G G G G     C
    G       + | | |                 T T
    C       G T G C
      C G A        G     TAGTCCTTAACGGGGCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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