The detailed information of tRNA gene sequence


Sequence ID>WENV183752047
Genome IDPPYE01030632
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 383
End posion on genome 296
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attcaggcga
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGAAACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGttt
Downstream region at tRNA end position 
ggtgcctatg
Secondary structure (Cloverleaf model)
>WENV183752047	Ser	GCT
                   a      Gttt ggtgcctatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGAAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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