The detailed information of tRNA gene sequence


Sequence ID>WENV183752103
Genome IDPPYE01030968
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 11779
End posion on genome 11855
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtgactgatt
tRNA gene sequence 
GGCCCAGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGATCGTCGGTTCGAG
TCCGTCCTGGGTCGCCA
Downstream region at tRNA end position 
attgtctttt
Secondary structure (Cloverleaf model)
>WENV183752103	Asp	GTC
                   t      GCCA attgtctttt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T T G       G T C G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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