The detailed information of tRNA gene sequence


Sequence ID>WENV183752178
Genome IDPPYE01031643
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 3283
End posion on genome 3198
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taggcgcaaa
tRNA gene sequence 
GGGTAGATGTCTGAGCGGTCTAAAGAGACGGTCTTGAAAACCGTTGAGGTGCAAGCCTCC
GCGAGTTCGAATCTCGCTCTGCCCGCat
Downstream region at tRNA end position 
caatcaaggg
Secondary structure (Cloverleaf model)
>WENV183752178	Ser	TGA
                   a      GCat caatcaaggg
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T
                     G - C
                     A - T          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    G       G T C T       G C G A G     C
    G         | | |                 T T
    T       A A G A
      C T A        G     TGAGGTGCAAGCCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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