The detailed information of tRNA gene sequence


Sequence ID>WENV183752387
Genome IDPPYE01038272
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1656
End posion on genome 1582
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGAAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCAAA
TCCTGTCCCCGCTACtc
Downstream region at tRNA end position 
aaatgcccag
Secondary structure (Cloverleaf model)
>WENV183752387	fMet	CAT
                   n      ACtc aaatgcccag
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G A A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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