The detailed information of tRNA gene sequence


Sequence ID>WENV183752581
Genome IDPPYE01046208
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 102252
End posion on genome 102176
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cagaatatgc
tRNA gene sequence 
GGGCTAGTAGCTCAGTTGGTCAGAGCTGGCGGCTCATAACCGCTTGGTCCCGGGTTCAAG
TCCTGGCTGGCCCACCA
Downstream region at tRNA end position 
aaaaagcacg
Secondary structure (Cloverleaf model)
>WENV183752581	Ile2	CAT
                   c      ACCA aaaaagcacg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        T     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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