The detailed information of tRNA gene sequence


Sequence ID>WENV183752633
Genome IDPPYE01046312
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 57162
End posion on genome 57250
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatcagtat
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTCCGAGAGGGGC
CGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
attaaatatt
Secondary structure (Cloverleaf model)
>WENV183752633	Ser	TGA
                   t      GCCA attaaatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACTCCGAGAGGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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