The detailed information of tRNA gene sequence


Sequence ID>WENV183753120
Genome IDPPYE01049018
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 5215
End posion on genome 5127
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagtatgtcc
tRNA gene sequence 
GGAGATGTATCGAAGCGGCCATAACGAGAACGACTCGAAATCGTTTTGTCCTTAACTGGG
CACGTGGGTTCGAATCCCACCATCTCCGCtg
Downstream region at tRNA end position 
aataagctgt
Secondary structure (Cloverleaf model)
>WENV183753120	Ser	CGA
                   c      GCtg aataagctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  C           | | |                 T T
  C         A C G A
    A T A          G     TTGTCCTTAACTGGGCAC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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