The detailed information of tRNA gene sequence


Sequence ID>WENV183753775
Genome IDPPYE01072177
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1205
End posion on genome 1290
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtcgactat
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGAACTGAGAGGTTCC
GGGGGTTCGAATCCCTCTCTCTCCGCta
Downstream region at tRNA end position 
aatactaaaa
Secondary structure (Cloverleaf model)
>WENV183753775	Ser	TGA
                   t      GCta aatactaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAACTGAGAGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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