The detailed information of tRNA gene sequence


Sequence ID>WENV183753914
Genome IDPPYE01074504
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 3211
End posion on genome 3298
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagaacacat
tRNA gene sequence 
GGAAGTGTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTACTCGTAAGGGTA
CCGCGAGTTCGAATCTCGCCGCTTCCGCaa
Downstream region at tRNA end position 
ccaaaggctg
Secondary structure (Cloverleaf model)
>WENV183753914	Ser	GCT
                   t      GCaa ccaaaggctg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G C G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCGTAAGGGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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