The detailed information of tRNA gene sequence


Sequence ID>WENV183754293
Genome IDPPYE01090418
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 51096
End posion on genome 51185
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcggttcaT
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGCAACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGTtt
Downstream region at tRNA end position 
actaccaata
Secondary structure (Cloverleaf model)
>WENV183754293	Ser	GCT
                   T      GTtt actaccaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGCAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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