The detailed information of tRNA gene sequence


Sequence ID>WENV183754437
Genome IDPPYE01091102
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 14575
End posion on genome 14487
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccgaaagaa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACTCCTAAAGGGT
ATCACGAGTTCGAATCTCGTTCTCTCCGCac
Downstream region at tRNA end position 
attgtttgta
Secondary structure (Cloverleaf model)
>WENV183754437	Ser	GGA
                   a      GCac attgtttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G C T C       A C G A G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACTCCTAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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