The detailed information of tRNA gene sequence


Sequence ID>WENV183755104
Genome IDPPYE01106475
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 370
End posion on genome 279
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cggacgtttT
tRNA gene sequence 
GGAGAAATACCCAAGCTGGCCGAAGGGGCTCCCCTGGAAAGGGAGTAGGTCGTTAATAGC
GGCGCGAGGGTTCGAATCCCTCTTTCTCCGTtt
Downstream region at tRNA end position 
tgttcaaagc
Secondary structure (Cloverleaf model)
>WENV183755104	Ser	GGA
                   T      GTtt tgttcaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
    T C G A        A      | | | | |     G
  G         A C C C       G A G G G     C
  G           | | |                 T T
  C         A G G G
    C G A          G     TAGGTCGTTAATAGCGGCGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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