The detailed information of tRNA gene sequence


Sequence ID>WENV183756100
Genome IDPPYE01124482
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 352
End posion on genome 262
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcaaccctT
tRNA gene sequence 
GGAGAAGTACCCAAGTGGCTGAAGGGGCTCGCCTGGAAAGTGAGTAGGTCGTTAATAGCG
GCGCGAGGGTTCAAATCCCTCCTTCTCCGTtg
Downstream region at tRNA end position 
gatatttcat
Secondary structure (Cloverleaf model)
>WENV183756100	Ser	GGA
                   T      GTtg gatatttcat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGTCGTTAATAGCGGCGC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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