The detailed information of tRNA gene sequence


Sequence ID>WENV183756107
Genome IDPPYE01125362
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 294
End posion on genome 368
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cagcgaacgt
tRNA gene sequence 
GGGGCCGTAGCTCAGTCGGTTAGAGCATGCGACTCATAATCGCCCGGTCCAGGGTTCAAG
CCCCTGCGGCCCCACtc
Downstream region at tRNA end position 
ttttgcgtcg
Secondary structure (Cloverleaf model)
>WENV183756107	Ile2	CAT
                   t      ACtc ttttgcgtcg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          C G
                    T     G T C C C     A
      T G A        A      | | | | |     A
    C       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    T   C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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