The detailed information of tRNA gene sequence


Sequence ID>WENV183756140
Genome IDPPYE01128183
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 297
End posion on genome 386
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggcatgagc
tRNA gene sequence 
GGAAGGGTGGCAGAGCGGCTTAATGCGGCGGTCTTGAAAACCGTTGACGTCGTGAGGCGT
CCGGGGGTTCAAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
aactcaaaac
Secondary structure (Cloverleaf model)
>WENV183756140	Ser	TGA
                   c      GCCA aactcaaaac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      T T A        G     TGACGTCGTGAGGCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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