The detailed information of tRNA gene sequence


Sequence ID>WENV183756307
Genome IDPPYE01129970
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 52634
End posion on genome 52710
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcccagacat
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGCCGGGCTCATAACCCGGAGGTCGTAGGTTCAAA
TCCTGCCCCCGCGACCA
Downstream region at tRNA end position 
agatctttga
Secondary structure (Cloverleaf model)
>WENV183756307	fMet	CAT
                   t      ACCA agatctttga
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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