The detailed information of tRNA gene sequence


Sequence ID>WENV183756612
Genome IDPPYE01130979
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 13507
End posion on genome 13593
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagtgtatat
tRNA gene sequence 
GGAGAGATATCGAAGTGGTCATAACGAGGCGGTCTTGAAAACCGTTTGTCCGCAAGGGCG
CGTGGGTTCGAATCCCACTCTCTCCGCtn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV183756612	Ser	TGA
                   t      GCtn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGTCCGCAAGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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