The detailed information of tRNA gene sequence


Sequence ID>WENV183756759
Genome IDPPYE01132667
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 232
End posion on genome 141
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attactatag
tRNA gene sequence 
GGAGCATTACCCAAGAGGTCGAAGGGGTCGCACTCGAAATGCGATAGGGCGTTTGTAGCG
CCGCCAGAGTTCAAATCTCTGATGCTCCGCCA
Downstream region at tRNA end position 
atcaacggta
Secondary structure (Cloverleaf model)
>WENV183756759	Ser	CGA
                   g      GCCA atcaacggta
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     G T C T C     A
      A G A        A      | | | | |     A
    G       A C C C       C A G A G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TAGGGCGTTTGTAGCGCCGC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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