The detailed information of tRNA gene sequence


Sequence ID>WENV183756971
Genome IDPPYE01139735
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1096
End posion on genome 1010
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgcaagagaa
tRNA gene sequence 
GGAGTTGTATCGAAGTGGTCATAACGGGGCGCACTCGAAATGCGTTAGCCCTCCGGGGCA
CGTGGGTTCGAATCCCACCAACTCCGCtt
Downstream region at tRNA end position 
gcgtgtttag
Secondary structure (Cloverleaf model)
>WENV183756971	Ser	CGA
                   a      GCtt gcgtgtttag
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TAGCCCTCCGGGGCAC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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