The detailed information of tRNA gene sequence


Sequence ID>WENV183757016
Genome IDPPYE01140858
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 124
End posion on genome 212
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtaattataa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACCCCTAAAGGGT
ATCACGAGTTCGAATCTCGTTCTCTCCGCtt
Downstream region at tRNA end position 
ttttgtttgt
Secondary structure (Cloverleaf model)
>WENV183757016	Ser	GGA
                   a      GCtt ttttgtttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G C T C       A C G A G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACCCCTAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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