The detailed information of tRNA gene sequence


Sequence ID>WENV183757060
Genome IDPPYE01143832
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1612
End posion on genome 1697
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaacatatt
tRNA gene sequence 
GGAAAGATGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGAACCGAGAGGTTCC
CGGGGTTCGAATCCCTGTCTCTCCGCtg
Downstream region at tRNA end position 
aacgtgctgg
Secondary structure (Cloverleaf model)
>WENV183757060	Ser	TGA
                   t      GCtg aacgtgctgg
                     G - C
                     G - C
                     A - T
                     A   C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAACCGAGAGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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