The detailed information of tRNA gene sequence


Sequence ID>WENV183757522
Genome IDPPYE01161709
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 380
End posion on genome 291
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacttctgcT
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGCAACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGTta
Downstream region at tRNA end position 
agtctttgat
Secondary structure (Cloverleaf model)
>WENV183757522	Ser	GCT
                   T      GTta agtctttgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGCAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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