The detailed information of tRNA gene sequence


Sequence ID>WENV183757728
Genome IDPPYE01170299
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 3795
End posion on genome 3722
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aatcaaacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTCTGTTCGAGT
CAGGCCTCCGCAACta
Downstream region at tRNA end position 
aaaaaagatc
Secondary structure (Cloverleaf model)
>WENV183757728	fMet	CAT
                   t      ACta aaaaaagatc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G G A C     A
      T G A        G      | + | | |     G
    T       C G A G       G T C T G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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