The detailed information of tRNA gene sequence


Sequence ID>WENV183758112
Genome IDPPYE01174054
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1546
End posion on genome 1470
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcccagacat
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGCCGGGCTCATAACCCGGAGGTCGTAGGTTCAAA
TCCTGCCCCCGCGACCA
Downstream region at tRNA end position 
agaacttgca
Secondary structure (Cloverleaf model)
>WENV183758112	fMet	CAT
                   t      ACCA agaacttgca
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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