The detailed information of tRNA gene sequence


Sequence ID>WENV183758405
Genome IDPPYE01186276
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 8247
End posion on genome 8159
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgacccgag
tRNA gene sequence 
GGAGTGATGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACGTCAAAAGCGT
ATCGGGGGTTCGAATCCCCCTTACTCCGCta
Downstream region at tRNA end position 
aaaagccgtt
Secondary structure (Cloverleaf model)
>WENV183758405	Ser	GGA
                   g      GCta aaaagccgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G + T
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G G G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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