The detailed information of tRNA gene sequence


Sequence ID>WENV183759921
Genome IDPPYE01214899
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 2428
End posion on genome 2355
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cagaatatgc
tRNA gene sequence 
GGGCTAGTAGCTCAGTTGGTCAGAGCTGGCGGCTCATAACCGCTTGGTCCCGGGTTCAAG
TCCTGGCTGGCCCAtag
Downstream region at tRNA end position 
aaaaaagcac
Secondary structure (Cloverleaf model)
>WENV183759921	Ile2	CAT
                   c      Atag aaaaaagcac
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        T     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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