The detailed information of tRNA gene sequence


Sequence ID>WENV183760410
Genome IDPPYE01232891
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 30752
End posion on genome 30842
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtaaagcat
tRNA gene sequence 
GGAGGATTACTCAAGAGGCTGAAGAGGACGGTTTGCTAAATCGTTAGGGCGGGTTACCGT
CGCTAGGGTTCGAATCCCTAATCCTCCGCCA
Downstream region at tRNA end position 
tgtaaagacc
Secondary structure (Cloverleaf model)
>WENV183760410	Ser	GCT
                   t      GCCA tgtaaagacc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     A T C C C     A
      A G A        A      | | | | |     G
    G       A C T C       T A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGGCGGGTTACCGTCGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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