The detailed information of tRNA gene sequence


Sequence ID>ENV08001294
Genome IDABMW01003290
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 83
End posion on genome 9
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gaagaataat
tRNA gene sequence 
GGTCCGTTCGTCTAGGGGTTAGGACGCCAGGTTTTCATCCTGGTAACAGGGGTTCGATTC
CCCTACGGACTACAA
Downstream region at tRNA end position 
attaaaatnn
Secondary structure (Cloverleaf model)
>ENV08001294	Glu	TTC
                   t      ACAA attaaaatnn
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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