The detailed information of tRNA gene sequence


Sequence ID>WENV183760447
Genome IDPPYE01233010
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 38111
End posion on genome 38187
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaaagttat
tRNA gene sequence 
GGTTCGGTAGTTCAGCTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGGGTTCGAG
TCCCGTCCGGACCGCCA
Downstream region at tRNA end position 
gaagcaaaag
Secondary structure (Cloverleaf model)
>WENV183760447	Asp	GTC
                   t      GCCA gaagcaaaag
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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