The detailed information of tRNA gene sequence


Sequence ID>WENV183760481
Genome IDPPYE01233108
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 22021
End posion on genome 21934
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaaactcat
tRNA gene sequence 
GGAAGTGTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTACGGGTAACCGTA
CCGGGGGTTCGAATCCCCCCGCTTCCGCtc
Downstream region at tRNA end position 
caaaggctgt
Secondary structure (Cloverleaf model)
>WENV183760481	Ser	GCT
                   t      GCtc caaaggctgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGTAACCGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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