The detailed information of tRNA gene sequence


Sequence ID>ENV08001298
Genome IDABMW01007375
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 131
End posion on genome 58
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nnnnnnnntc
tRNA gene sequence 
GCGAAAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAGT
CCCGTTTTTCGCTCtt
Downstream region at tRNA end position 
gaaatttaaa
Secondary structure (Cloverleaf model)
>ENV08001298	Gly	GCC
                   c      TCtt gaaatttaaa
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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