The detailed information of tRNA gene sequence


Sequence ID>WENV183761225
Genome IDPPYE01256280
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 44968
End posion on genome 44892
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agctgctgat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTCGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGTCTCCGCAACCA
Downstream region at tRNA end position 
gttcaatgcc
Secondary structure (Cloverleaf model)
>WENV183761225	fMet	CAT
                   t      ACCA gttcaatgcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    T       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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