The detailed information of tRNA gene sequence


Sequence ID>WENV183761315
Genome IDPPYE01256416
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 43542
End posion on genome 43614
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gaagatatat
tRNA gene sequence 
CGCGGGATGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGGAGGTTCGAGT
CCTCCTCCCGCTCgac
Downstream region at tRNA end position 
ccagcaaagg
Secondary structure (Cloverleaf model)
>WENV183761315	fMet	CAT
                   t      Cgac ccagcaaagg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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