The detailed information of tRNA gene sequence


Sequence ID>ENV08001303
Genome IDABMW01016138
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 91
End posion on genome 16
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acactctaga
tRNA gene sequence 
GTCCCCATCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGATAACCGGGGTTCGAAT
CCCCGTGGGGACGCCA
Downstream region at tRNA end position 
agttttttgg
Secondary structure (Cloverleaf model)
>ENV08001303	Glu	TTC
                   a      GCCA agttttttgg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C   A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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