The detailed information of tRNA gene sequence


Sequence ID>ENV08001305
Genome IDABMW01016369
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 23
End posion on genome 98
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgaaggtcaa
tRNA gene sequence 
GACCCCATCGTCTAGAGGCCTAGGACATCACCCTTTCACGGTGAGTACCGGGGTTCGAAT
CCCCGTGGGGTCGCCA
Downstream region at tRNA end position 
agtttgccga
Secondary structure (Cloverleaf model)
>ENV08001305	Glu	TTC
                   a      GCCA agtttgccga
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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