The detailed information of tRNA gene sequence


Sequence ID>ENV08001309
Genome IDABMW01023723
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 107
End posion on genome 33
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aaaacaaatg
tRNA gene sequence 
GTGATTGTAGCTCAGTTGGTTAGAGCGTCGGATTGTGGTTCCGAAGGTCGCGGGTTCGAG
ACCCGTCTTTCACCCtt
Downstream region at tRNA end position 
taaattagaa
Secondary structure (Cloverleaf model)
>ENV08001309	His	GTG
                   g      CCtt taaattagaa
                     G - C
                     T - A
                     G - C
                     A - T
                     T   T
                     T   T
                     G - C          A G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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