The detailed information of tRNA gene sequence


Sequence ID>WENV183761978
Genome IDPPYE01267382
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 199
End posion on genome 107
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaagaatgc
tRNA gene sequence 
GAGGGATTACCCAAGTCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGGGATTAACGT
CCCGCGGGGGTTCGAATCCCTCATCCCTCGCCA
Downstream region at tRNA end position 
tttaatttaa
Secondary structure (Cloverleaf model)
>WENV183761978	Ser	TGA
                   c      GCCA tttaatttaa
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGGATTAACGTCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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