The detailed information of tRNA gene sequence


Sequence ID>WENV183762181
Genome IDPPYE01275202
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 15610
End posion on genome 15701
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cactcaccat
tRNA gene sequence 
GGAGAGATGGCTGAGTTGGTCGAAGGCGCACGATTGGAAATCGTGTAGGCGTTAATAGCG
TCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaactccgca
Secondary structure (Cloverleaf model)
>WENV183762181	Ser	GGA
                   t      GCCA aaactccgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C G A          G     TAGGCGTTAATAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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