The detailed information of tRNA gene sequence


Sequence ID>WENV183762362
Genome IDPPYE01275559
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 20706
End posion on genome 20630
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgctttccc
tRNA gene sequence 
GGCCCGGTAGTTTAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCAGGGGTTCAAG
TCCCCTTCGGGTCGCCA
Downstream region at tRNA end position 
tttgcctcgg
Secondary structure (Cloverleaf model)
>WENV183762362	Asp	GTC
                   c      GCCA tttgcctcgg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T          T G
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       T T T G       A G G G G     C
    G       + | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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