The detailed information of tRNA gene sequence


Sequence ID>WENV183762680
Genome IDPPYE01279327
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 2650
End posion on genome 2562
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgagcatac
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCTAGTCTTGAAAACTAGTGATCCCGCGAGGGAC
CAAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
ttttatttta
Secondary structure (Cloverleaf model)
>WENV183762680	Ser	TGA
                   c      GCCA ttttatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       A A G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGATCCCGCGAGGGACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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