The detailed information of tRNA gene sequence


Sequence ID>WENV183763580
Genome IDPPYE01299649
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 101
End posion on genome 10
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagtcaattT
tRNA gene sequence 
GGAGAAATACCCAAGCTGGCCGAAGGGGCTCCCCTGGAAAGGGAGTAGGTCGTTAATAGC
GGCGCGAGGGTTCAAATCCCTCTTTCTCCGTta
Downstream region at tRNA end position 
atccgatnnn
Secondary structure (Cloverleaf model)
>WENV183763580	Ser	GGA
                   T      GTta atccgatnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
    T C G A        A      | | | | |     A
  G         A C C C       G A G G G     C
  G           | | |                 T T
  C         A G G G
    C G A          G     TAGGTCGTTAATAGCGGCGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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