The detailed information of tRNA gene sequence


Sequence ID>WENV183764061
Genome IDPPYE01312981
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 5924
End posion on genome 6000
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccatccaaat
tRNA gene sequence 
GGGGTTGTAGCTCAGTCGGTTAGAGCGTCGGCCTGTCACGCCGAAGGTCGAGAGTTCGAG
TCTCTTCAGCCCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV183764061	Asp	GTC
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          T G
                    T     T T C T C     A
      T G A        A      + | | | |     G
    C       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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