The detailed information of tRNA gene sequence


Sequence ID>WENV183764073
Genome IDPPYE01313461
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1429
End posion on genome 1353
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
attatattat
tRNA gene sequence 
TGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAAGTTCAAG
TCTTACCCCCGCCACCA
Downstream region at tRNA end position 
aaacgattta
Secondary structure (Cloverleaf model)
>WENV183764073	fMet	CAT
                   t      ACCA aaacgattta
                     T   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C A T T C     A
      T G A        A      | | | | |     A
    C       C G A G       G T A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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