The detailed information of tRNA gene sequence


Sequence ID>WENV183764126
Genome IDPPYE01315554
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1719
End posion on genome 1630
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gattgaggac
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCCGAAGGCGCACGCCTGCTAAGTGTGTAACCCGGTTTCGGGT
TCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tcttaaaaat
Secondary structure (Cloverleaf model)
>WENV183764126	Ser	GCT
                   c      GCCA tcttaaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TAACCCGGTTTCGGGTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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