The detailed information of tRNA gene sequence


Sequence ID>WENV183764136
Genome IDPPYE01316160
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 1001
End posion on genome 907
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
aatcctatat
tRNA gene sequence
GGAAGATCATCGTCCCCGGTGGGGCGGCTGGACTTCAAATCCAGATGGGGCCGCCAGCGG
TCCTTGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position
cttaagttca
Secondary structure (Cloverleaf model)
>WENV183764136	SeC	TCA
                   t      GCCA cttaagttca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    A     T G T C C     A
      C C C        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     ATGGGGCCGCCAGCGGTCCTTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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